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Benchmark results

small xyz

These benchmarks show the relative cost of iterating through a small set of coordinates in various ways.

large xyz

These benchmarks show the relative cost of iterating through a large set of coordinates in various ways.

huge xyz

These benchmarks show the relative cost of iterating through a huge set of coordinates in various ways.

rotation

These benchmarks show the relative cost of computing rotations directory from the quaternion and from a cached rotation matrix.

rigid collision detection

These benchmarks compare quadratic collision detection on two rigid bodies to using the sphere hierarchy.

refiners

These benchmarks compare the cost of getting the children of a hierarchy node to getting all leaves.

collision detection

These benchmarks compare various methods of collision detection.

nearest neighbors

These benchmarks compare various methods for computing nearest neighbors on 10 particles.

nearest neighbors medium

These benchmarks compare various methods for computing nearest neighbors on 100 particles.

nearest neighbors large

These benchmarks compare various methods for computing nearest neighbors on 1000 particles.

container access

These benchmarks compare the costs of access various types of containers.

container access large

These benchmarks compare the costs of access various types of containers.

connectivity

These benchmarks compare the costs of computing connectivity in various ways.

close pairs finders small

These benchmarks compare the various close pairs finders.

close pairs finders small many

These benchmarks compare the various close pairs finders with many close pairs.

close pairs finders

These benchmarks compare the various close pairs finders.

close pairs finders big

These benchmarks compare the various close pairs finders when there are many collisions.

brownian dynamics

These benchmarks look at various optimizations of brownian dynamics.

pdb

Reading pdb files

excluded volume

Various approacches for computing excluded volume between rigid bodies


Generated on Tue May 22 2012 23:33:20 for IMP by doxygen 1.8.1