This writes a PDB file at the specified interval during optimization. If the file name contains %1% then a new file is written each time with the %1% replaced by the index. Otherwise a new model is written each time to the same file.
Public Member Functions |
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| WritePDBOptimizerState (const atom::Hierarchies &mh, std::string file_name) |
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void | set_period (unsigned int p) |
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void | write (std::string file_name, unsigned int call=0, bool append=false) const |
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| OptimizerState (std::string name="OptimizerState %1%") |
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Optimizer * | get_optimizer () const |
| virtual void | set_is_optimizing (bool) |
| virtual void | update ()=0 |
| | Called when the Optimizer accepts a new conformation.
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std::size_t | __hash__ () const |
| virtual std::string | get_type_name () const =0 |
| | Return a string identifying the type of the object.
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| virtual IMP::base::VersionInfo | get_version_info () const =0 |
| | Get information about the module and version of the object.
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| void | set_check_level (CheckLevel l) |
| void | set_log_level (LogLevel l) |
| | Set the logging level used in this object.
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| void | set_was_used (bool tf) const |
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void | show (std::ostream &out=std::cout) const |
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const std::string & | get_name () const |
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void | set_name (std::string name) |