IMP::core::NearestNeighborsClosePairsFinder Class Reference

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Detailed Description

Find all nearby pairs using the algebra::NearestNeighbor code.

See also:

IMP::container::ClosePairsScoreState

Inheritance diagram for IMP::core::NearestNeighborsClosePairsFinder:

List of all members.

Static Public Member Functions
static NearestNeighborsClosePairsFinder *	get_from (IMP::base::Object *o)

Additional Inherited Members
Public Member Functions inherited from IMP::core::ClosePairsFinder
	ClosePairsFinder (std::string name)
virtual ParticlePairsTemp	get_close_pairs (const ParticlesTemp &pc) const =0
virtual ParticlePairsTemp	get_close_pairs (const ParticlesTemp &pca, const ParticlesTemp &pcb) const =0
virtual ParticleIndexPairs	get_close_pairs (Model *m, const ParticleIndexes &pc) const
virtual ParticleIndexPairs	get_close_pairs (Model *m, const ParticleIndexes &pca, const ParticleIndexes &pcb) const
virtual IntPairs	get_close_pairs (const algebra::BoundingBox3Ds &bbs) const =0
virtual IntPairs	get_close_pairs (const algebra::BoundingBox3Ds &bas, const algebra::BoundingBox3Ds &bbs) const =0
virtual void	set_distance (double d)
double	get_distance () const
virtual ParticlesTemp	get_input_particles (const ParticlesTemp &ps) const =0
virtual ContainersTemp	get_input_containers (const ParticlesTemp &ps) const =0
void	remove_pair_filter (PairPredicate *d)
template<class F >
void	remove_pair_filters_if (const F &f)
template<class List >
void	remove_pair_filters (List d)
template<class List >
void	set_pair_filters (List ps)
template<class List >
void	set_pair_filters_order (List ps)
unsigned int	add_pair_filter (PairPredicate *obj)
template<class List >
void	add_pair_filters (List objs)
void	clear_pair_filters ()
unsigned int	get_number_of_pair_filters () const
bool	get_has_pair_filters () const
PairPredicate *	get_pair_filter (unsigned int i) const
PairPredicates	get_pair_filters () const
void	reserve_pair_filters (unsigned int sz)
PairFilterIterator	pair_filters_begin ()
PairFilterIterator	pair_filters_end ()
PairFilterConstIterator	pair_filters_begin () const
PairFilterConstIterator	pair_filters_end () const
Public Member Functions inherited from IMP::base::Object
std::size_t	__hash__ () const
virtual std::string	get_type_name () const =0
	Return a string identifying the type of the object.
virtual IMP::base::VersionInfo	get_version_info () const =0
	Get information about the module and version of the object.
void	set_check_level (CheckLevel l)
void	set_log_level (LogLevel l)
	Set the logging level used in this object.
void	set_was_used (bool tf) const
void	show (std::ostream &out=std::cout) const
const std::string &	get_name () const
void	set_name (std::string name)

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The documentation for this class was generated from the following file:

• NearestNeighborsClosePairsFinder.h