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IMP::display::PymolWriter Class Reference

Detailed Description

Write a CGO file with the geometry.

The cgo file format is a simple format for displaying geometry in Pymol. The cgo writer supports points, spheres, cyliners, and segments. The file name should end in ".pym".

The geometry is assembled into objects in pymol based on the passed names. For example, all geometry named "box" becomes one pymol object. If many files are loaded into python defining the same objects, they become sequential frames in a movie. The frame numbers are determined sequentially from the file load order (so they can form a subset of the generated files).

This writer will write many frames to the same file.

Examples: initialize chains, displaying ensembles, markers, rigid brownian dynamics, multiscale, rigid body excluded volume, analyze convergence, nup84 cg, sample 0, nup84 rb, analyze 0, optimize balls

+ Inheritance diagram for IMP::display::PymolWriter:

List of all members.

Public Member Functions

 PymolWriter (base::TextOutput of)
 PymolWriter (const char *name)
 PymolWriter (std::string name)

Static Public Member Functions

static PymolWriterget_from (IMP::base::Object *o)

The documentation for this class was generated from the following file:

Generated on Fri Feb 10 2012 23:36:26 for IMP by doxygen 1.7.5.1