Detailed Description

Class to read EM maps (3D) in Spider and Xmipp formats.

Note:: : Compatible only with Xmipp 2.2 and Spider floating point maps; : A DensityHeader class must be provided

Inheritance diagram for IMP::em::SpiderMapReaderWriter:

Public Member Functions
	SpiderMapReaderWriter ()
	SpiderMapReaderWriter (String filename, bool skip_type_check, bool force_reversed, bool skip_extra_checkings)
	Full constructor.
void	read (const char filename, float *data, DensityHeader &header)
	Reads a map in Spider format and transfers the data and header.
void	write (const char filename, const float data, const DensityHeader &header)
	Writes a map in Spider format from data and header.

Static Public Member Functions
static SpiderMapReaderWriter *	get_from (IMP::base::Object *o)

Constructor & Destructor Documentation

IMP::em::SpiderMapReaderWriter::SpiderMapReaderWriter ( )

Empty constructor. It does not force reversed header and does not skip any of the tests

IMP::em::SpiderMapReaderWriter::SpiderMapReaderWriter	(	String	filename,
		bool	skip_type_check,
		bool	force_reversed,
		bool	skip_extra_checkings
	)

Full constructor.

Parameters:

[in]	filename	file to read
[in]	skip_type_check	if true, the check for type of image is skipped
[in]	force_reversed	if true, the reverse mode is enforced for reading and writting
[in]	skip_extra_checkings	if true, the most stringent tests for consistency of images are skipped when reading

void IMP::em::SpiderMapReaderWriter::read	(	const char *	filename,
		float **	data,
		DensityHeader &	header
	)

virtual

Reads a map in Spider format and transfers the data and header.

Parameters:

[in]	filename	file to read
[in]	data	pointer to the structure where to store the data
[in]	header	DensityHeader class where to store the info from the header.

void IMP::em::SpiderMapReaderWriter::write	(	const char *	filename,
		const float *	data,
		const DensityHeader &	header
	)

virtual

Writes a map in Spider format from data and header.

Parameters:

[in]	filename	file to write
[in]	data	pointer to the structure where data are stored
[in]	header	DensityHeader class where the header info is stored data from the header.

The documentation for this class was generated from the following file: