IMP::statistics::PartitionalClustering Class Reference

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Detailed Description

The base class for clusterings of data sets.

Data items are represented by an index. In a partitional clustering each item can only be contained on one cluster. The mapping between data items and the information needed by the clustering algorithm is maintained by a helper object such as Embedding.

Inheritance diagram for IMP::statistics::PartitionalClustering:

List of all members.

Public Member Functions
	PartitionalClustering (std::string name)
virtual const Ints &	get_cluster (unsigned int cluster_index) const =0
virtual int	get_cluster_representative (unsigned int cluster_index) const =0
virtual unsigned int	get_number_of_clusters () const =0
Public Member Functions inherited from IMP::base::Object
std::size_t	__hash__ () const
virtual std::string	get_type_name () const =0
	Return a string identifying the type of the object.
virtual IMP::base::VersionInfo	get_version_info () const =0
	Get information about the module and version of the object.
void	set_check_level (CheckLevel l)
void	set_log_level (LogLevel l)
	Set the logging level used in this object.
void	set_was_used (bool tf) const
void	show (std::ostream &out=std::cout) const
const std::string &	get_name () const
void	set_name (std::string name)

Additional Inherited Members
Protected Member Functions inherited from IMP::base::Object
	Object (std::string name)

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Member Function Documentation

virtual const Ints& IMP::statistics::PartitionalClustering::get_cluster ( unsigned int  cluster_index ) const

pure virtual

Return the list of indexes in the ith cluster.

Implemented in IMP::statistics::PartitionalClusteringWithCenter.

virtual int IMP::statistics::PartitionalClustering::get_cluster_representative ( unsigned int  cluster_index ) const

pure virtual

Return the index of an item that "typifies" the ith cluster.

Implemented in IMP::statistics::PartitionalClusteringWithCenter.

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The documentation for this class was generated from the following file:

• PartitionalClustering.h