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In addition to the information in the Clustering base class, PartitionalClusteringWithCenter stores a cluster center for each cluster. The cluster center is a point in the space defined by the embedding.
The representative for each cluster is the member whose location in the embedding is closest to the cluster center.
Inheritance diagram for IMP::statistics::PartitionalClusteringWithCenter:Public Member Functions | |
| const Ints & | get_cluster (unsigned int i) const |
| const algebra::VectorKD & | get_cluster_center (unsigned int i) const |
| int | get_cluster_representative (unsigned int i) const |
| unsigned int | get_number_of_clusters () const |
| Public Member Functions inherited from IMP::statistics::PartitionalClustering | |
| PartitionalClustering (std::string name) | |
| Public Member Functions inherited from IMP::base::Object | |
| std::size_t | __hash__ () const |
| virtual std::string | get_type_name () const =0 |
| Return a string identifying the type of the object. | |
| virtual IMP::base::VersionInfo | get_version_info () const =0 |
| Get information about the module and version of the object. | |
| void | set_check_level (CheckLevel l) |
| void | set_log_level (LogLevel l) |
| Set the logging level used in this object. | |
| void | set_was_used (bool tf) const |
| void | show (std::ostream &out=std::cout) const |
| const std::string & | get_name () const |
| void | set_name (std::string name) |
Static Public Member Functions | |
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static PartitionalClusteringWithCenter * | get_from (IMP::base::Object *o) |
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virtual |
Return the list of indexes in the ith cluster.
Implements IMP::statistics::PartitionalClustering.
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virtual |
Return the index of an item that "typifies" the ith cluster.
Implements IMP::statistics::PartitionalClustering.
