Class Hierarchy

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Go to the graphical class hierarchy

This inheritance list is sorted roughly, but not completely, alphabetically:

_ConstOptimizer

_ConstRestraint

IMP::isd::AbstractGrid::AbstractGrid

IMP::isd::AbstractGrid::AbstractService

IMP::Refiner::Accessor

ALIGN2D_PREPROCESSING

IMP::isd::Analysis::Analysis

IMP::domino::Assignment

AttributeSingletonScore

RMF::BallConstFactory

RMF::BallFactory

IMP::modeller::BinormalTerm

IMP::atom::BondGraph

IMP::algebra::grids::BoundedGridStorageD< D >

IMP::algebra::grids::DenseGridStorageD< 3, VT >

IMP::algebra::grids::GridD< 3, grids::DenseGridStorageD< 3, VT >, VT, grids::DefaultEmbeddingD< 3 > >

IMP::algebra::DenseGrid3D< VT >

IMP::algebra::grids::DenseGridStorageD< D, VT >

IMP::algebra::grids::BoundedGridStorageD< 3 >

IMP::algebra::grids::SparseGridStorageD< 3, VT, grids::BoundedGridStorageD< 3 > >

IMP::algebra::grids::GridD< 3, grids::SparseGridStorageD< 3, VT, grids::BoundedGridStorageD< 3 > >, VT, grids::DefaultEmbeddingD< 3 > >

IMP::algebra::SparseGrid3D< VT >

BoundingBox3DSingletonScore

IMP::algebra::BoundingBoxD< D >

RMF::CategoryD< Arity >

IMP::em2d::CenteredMat

IMP::atom::CHARMMAtomTopology

IMP::atom::CHARMMBondEndpoint

IMP::atom::CHARMMBondParameters

IMP::atom::CHARMMConnection< D >

IMP::atom::CHARMMConnection< 4 >

IMP::atom::CHARMMInternalCoordinate

IMP::atom::CHARMMDihedralParameters

IMP::em::CoarseConvolution

IMP::display::Color

RMF::ColoredConst

RMF::ColoredConstFactory

RMF::ColoredFactory

IMP::algebra::Cone3D

IMP::parallel::Context

IMP::base::CreateLogContext

IMP::algebra::Cylinder3D

RMF::CylinderConst

RMF::CylinderConstFactory

RMF::CylinderFactory

IMP::multifit::DataPointsAssignment

IMP::atom::Angle

IMP::atom::Bond

IMP::atom::Bonded

IMP::atom::Dihedral

IMP::atom::Mass

IMP::core::Hierarchy

IMP::atom::Hierarchy

IMP::atom::Atom

IMP::atom::CHARMMAtom

IMP::atom::Chain

IMP::atom::Domain

IMP::atom::Fragment

IMP::atom::Molecule

IMP::atom::Copy

IMP::atom::Residue

IMP::core::Reference

IMP::core::Typed

IMP::atom::Charged

IMP::atom::Diffusion

IMP::atom::RigidBodyDiffusion

IMP::core::Centroid

IMP::core::RigidBody

IMP::core::RigidMember

IMP::core::XYZR

IMP::atom::LennardJones

IMP::core::Cover

IMP::misc::CustomXYZR

IMP::display::Colored

IMP::em2d::ProjectionParameters

IMP::example::ExampleDecorator

IMP::isd::Nuisance

IMP::isd::Scale

IMP::isd::Switching

IMP::algebra::grids::DefaultEmbeddingD< D >

IMP::algebra::grids::GridD< D, grids::SparseGridStorageD< D, VT, grids::UnboundedGridStorageD< D > >, VT, grids::DefaultEmbeddingD< D > >

IMP::algebra::SparseUnboundedGridD< D, VT >

IMP::algebra::grids::DefaultEmbeddingD< 3 >

IMP::algebra::grids::GridD< 3, grids::DenseGridStorageD< 3, VT >, VT, grids::DefaultEmbeddingD< 3 > >

IMP::algebra::grids::GridD< 3, grids::SparseGridStorageD< 3, VT, grids::BoundedGridStorageD< 3 > >, VT, grids::DefaultEmbeddingD< 3 > >

IMP::algebra::grids::GridD< 3, grids::SparseGridStorageD< 3, VT, grids::UnboundedGridStorageD< 3 > >, VT, grids::DefaultEmbeddingD< 3 > >

IMP::algebra::SparseUnboundedGrid3D< VT >

IMP::multifit::DensityDataPoints

IMP::em::DensityHeader

IMP::DerivativeAccumulator

IMP::test::DirectorObjectChecker

IMP::restrainer::Display

IMP::em::DistanceMask

DistanceToSingletonScore

IMP::saxs::Distribution< ValueT >

IMP::saxs::Distribution< algebra::Vector3D >

IMP::saxs::DeltaDistributionFunction

IMP::saxs::Distribution< Float >

IMP::saxs::RadialDistributionFunction

IMP::atom::ElementTable

IMP::algebra::Ellipsoid3D

IMP::isd::Entry::Entry

IMP::parallel::Error

IMP::parallel::NetworkError

IMP::parallel::NoMoreSlavesError

IMP::parallel::RemoteError

IMP::example::ExampleTemplateClassD< D >

RMF::InternalException

RMF::IOException

RMF::UsageException

IMP::base::Exception

IMP::base::EventException

IMP::base::IndexException

IMP::base::IOException

IMP::base::ModelException

IMP::base::ValueException

IMP::algebra::grids::ExtendedGridIndexD< D >

IMP::isd::FIFOBasedGrid::FIFOBasedRemoteObject

IMP::isd::FileBasedGrid::FileBasedRemoteObject

RMF::FileConstHandle

RMF::FileHandle

IMP::multifit::FittingSolutionRecord

IMP::em::FittingSolutions

IMP::algebra::FixedXYZ

IMP::algebra::FixedZXZ

IMP::algebra::FixedZYZ

IMP::saxs::FormFactorTable

script10_flexible_fitting::general_parameters

IMP::core::GenericHierarchies

IMP::GenericScopedRemoveRestraint< SS >

IMP::GenericScopedRemoveScoreState< SS >

IMP::GenericScopedRestraint< SS >

IMP::GenericScopedScoreState< SS >

IMP::display::GeometryProcessor

IMP::display::FilterGeometry

IMP::display::Writer

IMP::display::TextWriter

IMP::display::BildWriter

IMP::display::ChimeraWriter

IMP::display::CMMWriter

IMP::display::PymolWriter

IMP::algebra::grids::GridD< D, Storage, Value, Embedding >

IMP::algebra::grids::GridIndexD< D >

IMP::em2d::HasHigherCCC< T >

IMP::em2d::HasLowerScore< T >

RMF::HDF5ConstAttributes< Base >

RMF::HDF5DataSetIndexD< D >

RMF::HDF5Handle

RMF::HDF5SharedHandle

RMF::HDF5MutableAttributes< Base >

RMF::HDF5Object

RMF::HDF5ConstAttributes< HDF5Object >

RMF::HDF5ConstDataSetD< TypeTraits, D >

RMF::HDF5MutableAttributes< HDF5ConstDataSetD< TypeTraits, D > >

RMF::HDF5DataSetD< TypeTraits, D >

RMF::HDF5ConstGroup

RMF::HDF5MutableAttributes< HDF5ConstGroup >

RMF::HDF5ConstFile

IMP::core::HierarchyTraits

IMP::core::HierarchyVisitor

IMP::core::HierarchyCounter

IMP::core::ModifierVisitor

IMP::statistics::HistogramD< D, Grid >

IMP::isd::History::History

IMP::em::ImageHeader

IMP::modeller::IMPRestraints

InteractionGraph

IMP::base::InternalException

RMF::JournalArticle

RMF::JournalArticleConst

RMF::JournalArticleConstFactory

RMF::JournalArticleFactory

IMP::em2d::JPGImageReaderWriter

IMP::em::KernelParameters

RMF::Key< TypeTraitsT, Arity >

IMP::Key< ID, LazyAdd >

IMP::em2d::LessPairBySecond< T >

IMP::algebra::LinearFit2D

IMP::algebra::grids::LogEmbeddingD< D >

IMP::isd::logfile::logfile

IMP::restrainer::Main

IMP::parallel::Manager

IMP::compatibility::map< Key, Data >

IMP::compatibility::map< GridIndexD< D >, VT >

IMP::em2d::MasksManager

IMP::em2d::MatchTemplateResult

modeller_refinement::md_parameters

IMP::modeller::ModelLoader

IMP::algebra::MultiArray< T, D >

IMP::algebra::MultiArray< T, 2 >

IMP::algebra::Matrix2D< T >

IMP::algebra::MultiArray< T, 3 >

IMP::algebra::Matrix3D< T >

IMP::isd::MultivariateFNormalSufficient

RMF::NodeConstHandle

RMF::NodeHandle

RMF::NodeIDD< Arity >

RMF::NodeSetConstHandle< D >

RMF::NodeSetHandle< D >

IMP::domino::OptimizeRestraints

IMP::isd::OrderedDict::OrderedDict

IMP::base::OwnerPointer< O >

IMP::PairDerivativeFunctor

IMP::PairFunctor

IMP::algebra::ParabolicFit2D

RMF::ParticleConst

RMF::ParticleConstFactory

RMF::ParticleFactory

IMP::ParticleTuple< D >

IMP::compatibility::piecewise_linear_distribution< T >

IMP::isd::utils::Pipe

IMP::PivyWriter

IMP::algebra::Plane3D

IMP::base::Pointer< O >

IMP::base::Pointer< internal::ModelData >

IMP::em2d::PolarResamplingParameters

IMP::algebra::PrincipalComponentAnalysisD< D >

IMP::saxs::Profile

IMP::em2d::ProjectionMask

IMP::isd::PyroGrid::PyroHandler

IMP::isd::PyroGrid::PyroProxy

IMP::PythonDirectedGraph

IMP::QuadDerivativeFunctor

IMP::QuadFunctor

IMP::em::RadiusDependentKernelParameters

IMP::test::RefCountChecker

IMP::base::RefCounted

IMP::base::Object

IMP::algebra::DynamicNearestNeighbor3D

IMP::algebra::NearestNeighborD< D >

IMP::algebra::VectorKDMetric

IMP::algebra::EuclideanVectorKDMetric

IMP::algebra::MaxVectorKDMetric

IMP::atom::CHARMMResidueTopologyBase

IMP::atom::CHARMMIdealResidueTopology

IMP::atom::CHARMMResidueTopology

IMP::atom::CHARMMPatch

IMP::atom::CHARMMSegmentTopology

IMP::atom::CHARMMTopology

IMP::atom::ForceFieldParameters

IMP::atom::CHARMMParameters

IMP::atom::Mol2Selector

IMP::atom::AllMol2Selector

IMP::atom::NonHydrogenMol2Selector

IMP::atom::PDBSelector

IMP::atom::AllPDBSelector

IMP::atom::AndPDBSelector

IMP::atom::NonAlternativePDBSelector

IMP::atom::ATOMPDBSelector

IMP::atom::CAlphaPDBSelector

IMP::atom::CBetaPDBSelector

IMP::atom::ChainPDBSelector

IMP::atom::CPDBSelector

IMP::atom::HydrogenPDBSelector

IMP::atom::NonWaterNonHydrogenPDBSelector

IMP::atom::NonWaterPDBSelector

IMP::atom::NPDBSelector

IMP::atom::PPDBSelector

IMP::atom::WaterPDBSelector

IMP::atom::NotPDBSelector

IMP::atom::OrPDBSelector

IMP::atom::SmoothingFunction

IMP::atom::ForceSwitch

IMP::base::FailureHandler

IMP::atom::WritePDBFailureHandler

IMP::base::FailureHandlerBase

IMP::Configuration

IMP::ConfigurationSet

IMP::PairContainer

IMP::atom::BondPairContainer

IMP::container::AllBipartitePairContainer

IMP::container::AllPairContainer

IMP::container::CloseBipartitePairContainer

IMP::container::ClosePairContainer

IMP::container::ConnectingPairContainer

IMP::container::ConsecutivePairContainer

IMP::container::ExclusiveConsecutivePairContainer

IMP::container::ListPairContainer

IMP::container::PairContainerSet

IMP::QuadContainer

IMP::container::ListQuadContainer

IMP::container::QuadContainerSet

IMP::SingletonContainer

IMP::container::ListSingletonContainer

IMP::container::SingletonContainerSet

IMP::TripletContainer

IMP::container::ListTripletContainer

IMP::container::TripletContainerSet

IMP::core::ClosePairsFinder

IMP::core::BoxSweepClosePairsFinder

IMP::core::GridClosePairsFinder

IMP::core::NearestNeighborsClosePairsFinder

IMP::core::QuadraticClosePairsFinder

IMP::core::RigidClosePairsFinder

IMP::core::DataObject< Data >

IMP::core::Mover

IMP::core::MoverBase

IMP::core::BallMover

IMP::core::NormalMover

IMP::core::RigidBodyMover

IMP::core::SerialMover

IMP::isd::MolecularDynamicsMover

IMP::display::Geometry

IMP::atom::SelectionGeometry

IMP::display::BoundingBoxGeometry

IMP::display::CompoundGeometry

IMP::display::CylinderGeometry

IMP::display::EllipsoidGeometry

IMP::display::FilterGeometry

IMP::display::LabelGeometry

IMP::display::PairGeometry

IMP::core::EdgePairGeometry

IMP::display::PairsGeometry

IMP::core::EdgePairsGeometry

IMP::display::PointGeometry

IMP::display::PolygonGeometry

IMP::display::ReferenceFrameGeometry

IMP::display::RestraintGeometry

IMP::display::RestraintSetGeometry

IMP::display::SegmentGeometry

IMP::display::SingletonGeometry

IMP::atom::BondGeometry

IMP::atom::HierarchyGeometry

IMP::core::RigidBodyHierarchyGeometry

IMP::core::XYZDerivativeGeometry

IMP::core::XYZRGeometry

IMP::display::SingletonsGeometry

IMP::atom::BondsGeometry

IMP::atom::HierarchiesGeometry

IMP::core::XYZRsGeometry

IMP::display::SphereGeometry

IMP::display::SurfaceMeshGeometry

IMP::display::TriangleGeometry

IMP::display::Writer

IMP::domino::AssignmentContainer

IMP::domino::ClusteredAssignmentContainer

IMP::domino::HeapAssignmentContainer

IMP::domino::ListAssignmentContainer

IMP::domino::PackedAssignmentContainer

IMP::domino::RangeViewAssignmentContainer

IMP::domino::ReadAssignmentContainer

IMP::domino::ReadHDF5AssignmentContainer

IMP::domino::SampleAssignmentContainer

IMP::domino::WriteAssignmentContainer

IMP::domino::WriteHDF5AssignmentContainer

IMP::domino::AssignmentsTable

IMP::domino::BranchAndBoundAssignmentsTable

IMP::domino::ListAssignmentsTable

IMP::domino::RecursiveAssignmentsTable

IMP::domino::SimpleAssignmentsTable

IMP::domino::ParticleStates

IMP::domino::CompoundStates

IMP::domino::IndexStates

IMP::domino::NestedRigidBodyStates

IMP::domino::PermutationStates

IMP::domino::RecursiveStates

IMP::domino::RigidBodyStates

IMP::domino::XYZStates

IMP::em2d::GridStates

IMP::em2d::ProjectionStates

IMP::domino::ParticleStatesTable

IMP::domino::SubsetFilter

IMP::domino::MinimumRestraintScoreSubsetFilter

IMP::domino::RestraintScoreSubsetFilter

IMP::domino::SubsetFilterTable

IMP::domino::DisjointSetsSubsetFilterTable

IMP::domino::EqualitySubsetFilterTable

IMP::domino::EquivalenceAndExclusionSubsetFilterTable

IMP::domino::EquivalenceSubsetFilterTable

IMP::domino::ExclusionSubsetFilterTable

IMP::domino::ListSubsetFilterTable

IMP::domino::MinimumRestraintScoreSubsetFilterTable

IMP::domino::PairListSubsetFilterTable

IMP::domino::ProbabilisticSubsetFilterTable

IMP::domino::RestraintScoreSubsetFilterTable

IMP::em2d::DistanceFilterTable

IMP::example::ExampleSubsetFilterTable

IMP::em2d::Image

IMP::em2d::ProjectionFinder

IMP::em2d::ScoreFunction

IMP::em2d::ChiSquaredScore

IMP::em2d::EM2DScore

IMP::em::CoarseCC

IMP::em::CoarseCCatIntervals

IMP::em::DensityMap

IMP::em::SampledDensityMap

IMP::em::SurfaceShellDensityMap

IMP::em::MapReaderWriter

IMP::em::MRCReaderWriter

IMP::em::SpiderMapReaderWriter

IMP::isd::BivariateFunction

IMP::isd::Covariance1DFunction

IMP::isd::FNormal

IMP::isd::GaussianProcessInterpolation

IMP::isd::UnivariateFunction

IMP::isd::GeneralizedGuinierPorodFunction

IMP::isd::Linear1DFunction

IMP::isd::vonMises

IMP::isd::vonMisesSufficient

IMP::multifit::AssemblyHeader

IMP::multifit::ComponentHeader

IMP::multifit::DataPoints

IMP::multifit::SettingsData

IMP::atom::Simulator

IMP::atom::BrownianDynamics

IMP::atom::MolecularDynamics

IMP::isd::MolecularDynamics

IMP::bullet::ResolveCollisionsOptimizer

IMP::core::ConjugateGradients

IMP::core::MonteCarlo

IMP::core::MonteCarloWithLocalOptimization

IMP::core::MonteCarloWithBasinHopping

IMP::isd::HybridMonteCarlo

IMP::core::SteepestDescent

IMP::gsl::GSLOptimizer

IMP::gsl::ConjugateGradients

IMP::gsl::QuasiNewton

IMP::gsl::Simplex

IMP::OptimizerState

IMP::atom::BerendsenThermostatOptimizerState

IMP::atom::LangevinThermostatOptimizerState

IMP::atom::RemoveRigidMotionOptimizerState

IMP::atom::RemoveTranslationOptimizerState

IMP::atom::VelocityScalingOptimizerState

IMP::atom::WritePDBOptimizerState

IMP::container::EventPairsOptimizerState

IMP::container::EventQuadsOptimizerState

IMP::container::EventSingletonsOptimizerState

IMP::container::EventTripletsOptimizerState

IMP::container::PairsEventOptimizerState

IMP::container::PairsOptimizerState

IMP::container::QuadsEventOptimizerState

IMP::container::QuadsOptimizerState

IMP::container::SingletonsEventOptimizerState

IMP::container::SingletonsOptimizerState

IMP::container::TripletsEventOptimizerState

IMP::container::TripletsOptimizerState

IMP::core::WriteRestraintScoresOptimizerState

IMP::display::WriteOptimizerState

IMP::rmf::SaveHierarchyConfigurationOptimizerState

IMP::PairDerivativeModifier

IMP::PairFilter

IMP::atom::BondedPairFilter

IMP::atom::SameResiduePairFilter

IMP::atom::StereochemistryPairFilter

IMP::container::ExclusiveConsecutivePairFilter

IMP::container::InContainerPairFilter

IMP::misc::CommonEndpointPairFilter

IMP::PairModifier

IMP::PairPredicate

IMP::core::ConstantPairPredicate

IMP::core::OrderedTypePairPredicate

IMP::core::UnorderedTypePairPredicate

IMP::atom::CoulombPairScore

IMP::atom::LennardJonesPairScore

IMP::container::MinimumPairScore

IMP::core::ClosePairsPairScore

IMP::core::DistancePairScore

IMP::core::HarmonicDistancePairScore

IMP::core::HarmonicSphereDistancePairScore

IMP::core::HarmonicUpperBoundSphereDiameterPairScore

IMP::core::HarmonicUpperBoundSphereDistancePairScore

IMP::core::KClosePairsPairScore

IMP::core::RigidBodyDistancePairScore

IMP::core::NormalizedSphereDistancePairScore

IMP::core::RefinedPairsPairScore

IMP::core::SoftSpherePairScore

IMP::core::SphereDistancePairScore

IMP::core::StatisticalPairScore< Key, BIPARTITE, INTERPOLATE, SPARSE >

IMP::core::TransformedDistancePairScore

IMP::core::TypedPairScore

IMP::core::WeightedSphereDistancePairScore

IMP::example::ExamplePairScore

IMP::examplesystemlocal::ExamplePairScore

IMP::isd::RepulsiveDistancePairScore

IMP::misc::LogPairScore

IMP::misc::LowestRefinedPairScore

IMP::misc::SoftCylinderPairScore

IMP::core::StatisticalPairScore< DopeType, false, true >

IMP::atom::DopePairScore

IMP::core::StatisticalPairScore< ProteinLigandType, true, false >

IMP::atom::ProteinLigandAtomPairScore

IMP::QuadDerivativeModifier

IMP::QuadFilter

IMP::container::InContainerQuadFilter

IMP::QuadModifier

IMP::QuadPredicate

IMP::core::ConstantQuadPredicate

IMP::core::OrderedTypeQuadPredicate

IMP::core::UnorderedTypeQuadPredicate

IMP::container::MinimumQuadScore

IMP::atom::BondEndpointsRefiner

IMP::core::ChildrenRefiner

IMP::core::FixedRefiner

IMP::core::LeavesRefiner

IMP::core::TableRefiner

IMP::test::TestRefiner

IMP::atom::CHARMMStereochemistryRestraint

IMP::container::MinimumPairRestraint

IMP::container::MinimumQuadRestraint

IMP::container::MinimumSingletonRestraint

IMP::container::MinimumTripletRestraint

IMP::container::PairsRestraint

IMP::atom::ProteinLigandRestraint

IMP::container::PredicatePairsRestraint

IMP::container::PredicateQuadsRestraint

IMP::container::PredicateSingletonsRestraint

IMP::container::PredicateTripletsRestraint

IMP::container::QuadsRestraint

IMP::container::SingletonsRestraint

IMP::container::TripletsRestraint

IMP::core::ConnectivityRestraint

IMP::core::ConstantRestraint

IMP::core::DiameterRestraint

IMP::core::DihedralRestraint

IMP::core::DistanceRestraint

IMP::core::ExcludedVolumeRestraint

IMP::core::MinimumRestraint

IMP::core::MSConnectivityRestraint

IMP::core::VolumeRestraint

IMP::em2d::DummyRestraint

IMP::em2d::Em2DRestraint

IMP::em2d::Fine2DRegistrationRestraint

IMP::em2d::ParticlesDummyRestraint

IMP::em::DensityFillingRestraint

IMP::em::EnvelopePenetrationRestraint

IMP::em::FitRestraint

IMP::example::ExampleComplexRestraint

IMP::example::ExampleRestraint

IMP::examplesystemlocal::ExampleRestraint

IMP::isd::ISDRestraint

IMP::isd::AmbiguousNOERestraint

IMP::isd::AmbiguousRestraint

IMP::isd::GaussianProcessInterpolationRestraint

IMP::isd::GaussianRestraint

IMP::isd::JeffreysRestraint

IMP::isd::LognormalRestraint

IMP::isd::MarginalHBondRestraint

IMP::isd::MarginalNOERestraint

IMP::isd::NOERestraint

IMP::isd::SlidingPriorRestraint

IMP::isd::vonMisesKappaConjugateRestraint

IMP::isd::vonMisesKappaJeffreysRestraint

IMP::isd::LogicalORRestraint

IMP::isd::TALOSRestraint

IMP::modeller::ModellerRestraints

IMP::modeller::MultipleBinormalRestraint

IMP::multifit::ComplementarityRestraint

IMP::multifit::RadiusOfGyrationRestraint

IMP::multifit::WeightedExcludedVolumeRestraint

IMP::PairScoreRestraint

IMP::core::PairRestraint

IMP::PairsScoreRestraint

IMP::QuadScoreRestraint

IMP::core::QuadRestraint

IMP::QuadsScoreRestraint

IMP::RestraintSet

IMP::saxs::RadiusOfGyrationRestraint

IMP::saxs::Restraint

IMP::SingletonScoreRestraint

IMP::core::SingletonRestraint

IMP::SingletonsScoreRestraint

IMP::TripletScoreRestraint

IMP::core::TripletRestraint

IMP::core::AngleRestraint

IMP::TripletsScoreRestraint

IMP::core::MCCGSampler

IMP::domino::DiscreteSampler

IMP::domino::BranchAndBoundSampler

IMP::domino::DominoSampler

IMP::ScoreState

IMP::Constraint

IMP::container::PairsConstraint

IMP::container::QuadsConstraint

IMP::container::SingletonsConstraint

IMP::container::TripletsConstraint

IMP::core::PairConstraint

IMP::core::QuadConstraint

IMP::core::SingletonConstraint

IMP::core::TripletConstraint

IMP::example::ExampleConstraint

IMP::isd::MaintainScaleOrderConstraint

IMP::container::PairContainerStatistics

IMP::container::QuadContainerStatistics

IMP::container::SingletonContainerStatistics

IMP::container::TripletContainerStatistics

IMP::core::ChecksScoreState

IMP::core::MoveStatisticsScoreState

IMP::domino::DependencyScoreState

IMP::em2d::ProjectionParametersScoreState

IMP::misc::StateAdaptor

IMP::SingletonDerivativeModifier

IMP::core::DerivativesFromRefined

IMP::core::DerivativesToRefined

IMP::SingletonFilter

IMP::container::InContainerSingletonFilter

IMP::SingletonModifier

IMP::atom::CoverBond

IMP::core::CentroidOfRefined

IMP::core::CoverRefined

IMP::core::Transform

IMP::core::TransformationAndReflectionSymmetry

IMP::core::TransformationSymmetry

IMP::example::ExampleSingletonModifier

IMP::examplesystemlocal::ExampleSingletonModifier

IMP::SingletonPredicate

IMP::core::AttributeSingletonPredicate

IMP::core::ConstantSingletonPredicate

IMP::core::InBoundingBox3DSingletonPredicate

IMP::core::OrderedTypeSingletonPredicate

IMP::core::UnorderedTypeSingletonPredicate

IMP::SingletonScore

IMP::atom::AngleSingletonScore

IMP::atom::BondSingletonScore

IMP::atom::DihedralSingletonScore

IMP::atom::ImproperSingletonScore

IMP::container::MinimumSingletonScore

IMP::core::GenericAttributeSingletonScore< UF >

IMP::core::GenericBoundingBox3DSingletonScore< UF >

IMP::core::GenericDistanceToSingletonScore< UF >

IMP::core::PredicateSingletonScore< Predicate, Score >

IMP::core::SphereDistanceToSingletonScore

IMP::statistics::Embedding

IMP::em::HighDensityEmbedding

IMP::statistics::ConfigurationSetXYZEmbedding

IMP::statistics::ParticleEmbedding

IMP::statistics::RecursivePartitionalClusteringEmbedding

IMP::statistics::VectorDEmbedding

IMP::statistics::Metric

IMP::statistics::ConfigurationSetRMSDMetric

IMP::statistics::RecursivePartitionalClusteringMetric

write_a_metric::MyMetric

IMP::statistics::PartitionalClustering

IMP::statistics::PartitionalClusteringWithCenter

IMP::TripletDerivativeModifier

IMP::TripletFilter

IMP::container::InContainerTripletFilter

IMP::TripletModifier

IMP::TripletPredicate

IMP::core::ConstantTripletPredicate

IMP::core::OrderedTypeTripletPredicate

IMP::core::UnorderedTypeTripletPredicate

IMP::TripletScore

IMP::container::MinimumTripletScore

IMP::core::AngleTripletScore

IMP::UnaryFunction

IMP::core::ClosedCubicSpline

IMP::core::Cosine

IMP::core::Harmonic

IMP::core::HarmonicLowerBound

IMP::core::HarmonicUpperBound

IMP::core::HarmonicWell

IMP::core::Linear

IMP::core::OpenCubicSpline

IMP::core::TruncatedHarmonic< DIRECTION >

IMP::example::ExampleUnaryFunction

IMP::misc::WormLikeChain

IMP::example::ExampleRefCounted

IMP::saxs::Score

IMP::algebra::ReferenceFrame3D

IMP::algebra::Reflection3D

IMP::em2d::RegistrationResult

IMP::restrainer::Representation

RMF::ResidueConst

RMF::ResidueConstFactory

RMF::ResidueFactory

IMP::restrainer::Restraint

IMP::RestraintStatistics

IMP::isd::AbstractGrid::Result

RMF::RigidParticle

RMF::RigidParticleConst

RMF::RigidParticleConstFactory

RMF::RigidParticleFactory

IMP::atom::RMSDCalculator

IMP::multifit::RMSDClustering< TransT >

IMP::algebra::Rotation2D

IMP::algebra::Rotation3D

IMP::ScopedAddCacheAttribute< Key, Value >

IMP::ScopedFailureHandler

IMP::ScopedSetAttribute< Key, Value >

ScopedSetFloatAttribute

RMF::ScoreConst

RMF::ScoreConstFactory

RMF::ScoreFactory

IMP::algebra::Segment3D

IMP::em2d::SegmentationParameters

IMP::atom::Selection

IMP::isd::AbstractGrid::Server

IMP::compatibility::set< Key >

IMP::base::SetCheckState

IMP::base::SetLogState

IMP::base::SetLogTarget

IMP::isd::shared_functions::sfo_common

IMP::restrainer::SimpleConnectivity

IMP::restrainer::SimpleDiameter

IMP::restrainer::SimpleDistance

IMP::restrainer::SimpleEMFit

IMP::restrainer::SimpleExcludedVolume

IMP::SingletonDerivativeFunctor

IMP::SingletonFunctor

IMP::parallel::Slave

IMP::parallel::LocalSlave

IMP::parallel::SlaveArray

IMP::parallel::SGEPESlaveArray

IMP::parallel::SGEQsubSlaveArray

IMP::saxs::SolventAccessibleSurface

IMP::algebra::grids::SparseGridStorageD< D, VT, Base, Map >

SparseUnboundedIntGrid3D

IMP::algebra::SphereD< D >

IMP::algebra::SpherePatch3D

IMP::algebra::SphericalVector3D

IMP::em::SpiderHeader

IMP::em2d::SpiderImageReaderWriter

IMP::isd::Statistics::Statistics

IMP::domino::Subset

IMP::isd::TALOSReader::TALOSReader

IMP::test::TestCase

IMP::test::ApplicationTestCase

IMP::base::TextInput

IMP::base::TextOutput

IMP::algebra::Transformation2D

IMP::algebra::Transformation3D

IMP::algebra::Triangle3D

IMP::TripletDerivativeFunctor

IMP::TripletFunctor

IMP::algebra::grids::UnboundedGridStorageD< D >

IMP::algebra::grids::SparseGridStorageD< D, VT, grids::UnboundedGridStorageD< D > >

IMP::algebra::grids::GridD< D, grids::SparseGridStorageD< D, VT, grids::UnboundedGridStorageD< D > >, VT, grids::DefaultEmbeddingD< D > >

IMP::algebra::grids::UnboundedGridStorageD< 3 >

IMP::algebra::grids::SparseGridStorageD< 3, VT, grids::UnboundedGridStorageD< 3 > >

IMP::algebra::grids::GridD< 3, grids::SparseGridStorageD< 3, VT, grids::UnboundedGridStorageD< 3 > >, VT, grids::DefaultEmbeddingD< 3 > >

IMP::base::UncheckedWeakPointer< O >

IMP::base::UsageException

RMF::vector< T >

IMP::algebra::VectorD< D >

IMP::VectorOfRefCounted< RC, Policy >

IMP::base::VersionInfo

IMP::base::WeakPointer< O >

IMP::display::WriterOutput

IMP::restrainer::XMLDisplay

IMP::restrainer::XMLRepresentation

IMP::restrainer::XMLRestraint

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