The purpose of this page is to discuss and document the steps needed for a public release.
Todo list
task |
people |
timeframe |
Finalize licensing, legal issues |
Ben |
soon, waiting for UCSF |
dihedral creation from bond graph |
Ben |
Jan 30 |
Lennard Jones and Coulomb scores |
Ben |
sooner than Dec 15 |
DOPE |
Dave |
Nov 15 |
setup/compute bonded terms |
Ben |
Jan 30 |
fill in missing atoms in a molecular hierarchy |
Ben |
Jan 30 |
transformation to/from internal coordinates |
Ben |
nonblocking |
IMP.em examples and documentation. Make clear what module supports. Provide examples. Remove doxygen errors. |
Keren |
few examples are there, more to come. mid November |
IMP.em 2D scoring |
Javi |
end of October, functionality is done |
IMP.domino examples and documentation |
Keren |
Nov 15 |
IMP.saxs documention, examples. Clear statement of scope |
Dina, SJ |
oct 9 |
nup84 based example |
Jeremy, Elina |
Mid November |
multifit module: sample by anchor points based fitting and optimize using DOMINO. Will include examples. |
Keren |
end of November |
26S based example: just ring |
Keren+Frido, Elina |
|
flexible fitting (to EM) |
Keren, Javi |
needs force field, not going to happen |
XML based initialization (IMP.restrainer) |
Elina |
end of October |
add public read only access to SVN |
Ben |
easy once needed |
add a place to put private modules for nightly builds (probably just another project in SVN that has nightly builds but is not distributed) |
Ben |
can wait until needed |
better presentation of the nightly build reports |
Ben |
nonblocking |
fix PDB write??? |
Dina |
mid May |
document or remove IMP.search |
Daniel |
move to unstable code (?) |
IMP.statistics: add new kmeans and gmm code. The code is functioning, left to document and add more test cases. |
Keren |
end of November |
provide high level view of scope of IMP, with clear entry points for users of different sort of data and a clear explaination of what sort of user is required (be able to read python scripts) |
Daniel |
from paper |
GPL build mode |
Daniel |
end of October |
R export/import |
Keren |
(nonblocking) |
