dsrpdb::Model Class Reference

#include <Model.h>

List of all members.

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Detailed Description

A class representing a single model from a PDB file.

You can iterator through the chains and soon the heterogens.

Examples:

pdb_align.cc, pdb_align_points.cc, pdb_distance.cc, and pdb_split.cc.

Definition at line 35 of file Model.h.

Public Member Functions
	Model ()
	Model (unsigned int i)
size_t	number_of_chains () const
Protein &	chain (unsigned int i)
const Protein &	chain (unsigned int i) const
void	new_chain (const Protein &p)
void	write (std::ostream &out) const
int	index () const
void	set_index (int ind)

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Constructor & Destructor Documentation

dsrpdb::Model::Model

(

)

Construct an empty model.

dsrpdb::Model::Model

(

unsigned int

i

)

Construct an empty model with a number.

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Member Function Documentation

size_t dsrpdb::Model::number_of_chains

(

)

const

The number of strands.

Examples:

pdb_align.cc, pdb_distance.cc, and pdb_split.cc.

Protein& dsrpdb::Model::chain

(

unsigned int

i

)

get the ith strand

Examples:

pdb_align.cc, pdb_align_points.cc, pdb_distance.cc, and pdb_split.cc.

const Protein& dsrpdb::Model::chain

(

unsigned int

i

)

const

get the ith strand

void dsrpdb::Model::new_chain

(

const Protein &

p

)

add a strand

Examples:

pdb_split.cc.

void dsrpdb::Model::write

(

std::ostream &

out

)

const

write to a pdb

int dsrpdb::Model::index

(

)

const [inline]

return the index or -1 if it is not valid

Examples:

pdb_align.cc, pdb_distance.cc, and pdb_split.cc.

Definition at line 57 of file Model.h.

void dsrpdb::Model::set_index

(

int

ind

)

[inline]

set the index

Definition at line 60 of file Model.h.

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The documentation for this class was generated from the following file:

• Model.h