modeller4

[sasson iris <sassonir AT cs.bgu.ac.il>]

Hi
I want to use modeller to expand CA models to full atom model.
When i give modeller an alignment of the query with a sequence from a
pdbfile it changes the position of the CAs, that is , my original model
changes. 
Can i give modeller a parameter that sets restrictions regarding where the
atoms around the backbone are positioned ? 
Can i set this restraint to some interval ?



Thanks alot !!!!
Iris.
I