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Re: [modeller_usage] Regarding manual protein sequence alignment
- To: "Luis Rosales" <ludwig AT correo.biomedicas.unam.mx>, rajesh rengaraj <rajesh_rengaraj AT yahoo.co.in>, inbios groups <inbios AT yahoogroups.com>, modeller <modeller_usage@listsrv.ucsf.edu>, groups mtech <biopearls AT yahoogroups.com>
- Subject: Re: [modeller_usage] Regarding manual protein sequence alignment
- From: "Luis Rosales" <ludwig AT correo.biomedicas.unam.mx>
- Date: Tue, 15 Mar 2005 19:41:00 -0500
- Cc:
Hi,
I must add an errata:
> (You could have a very bad stereochem [maybe as a result of a bad/poorly
> refined model] and a good rama plot. Modeller is more suceptible to
> give you the inverse scenario: a really good stereochem, without
> regard of the quality of your alignment...)
>
thats false, what I wanted to say is:
You coud have a very bad stereochem (and that is measured in a baaaad
ramachandran plot) an a good seq alignment....
Sorry for my mistake...
L.