[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
[modeller_usage] dihedral restraints
- To: modeller_usage@listsrv.ucsf.edu
- Subject: [modeller_usage] dihedral restraints
- From: Judy Barnett-Norris <judy_norris AT earthlink.net>
- Date: Tue, 24 May 2005 16:08:13 -0400
Hello,
I have been reading about the restraints and have a question. I am
modeling a GPCR using rhodopsin's crystal structure as my template. I
want to model one area of a helix using some backbone dihedral values
different from rhodopsin (10 actual dihedrals). Do I use the
special.restraints script and list my specific dihedrals or do I need to
do something similar to the cis proline example where I would unpick and
then add each restraint?? If you could just point me in the
direction....
Thanks,
Judy