Re: [modeller_usage] ERROR: No alignment

[Modeller Caretaker <modeller-care@ucsf.edu>]

Joydeep wrote:
> Hi, I'm trying to model a large protein(763 amino acids) with a
> distant template obtained from mGenThreader...but when i run the
> model.py command (as shown in tutorial), i get the following: 
> -------------------------------------------------------------------- 
> Type 'mod8v2' to run Modeller. _modeller.error: check_a_335E> No
> alignment.

You should check the .log file for additional information. If this is
not informative, please send your full files (i.e. input PDBs, Python
script, and alignment) so we can figure out your problem - see
http://salilab.org/modeller/manual/node11.html

	Ben Webb, Modeller Caretaker
--
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