Re: [modeller_usage] Using DOPE with membrane proteins

[Modeller Caretaker <modeller-care@ucsf.edu>]

John Simms wrote:
> I was wondering if DOPE could be used with membrane proteins? Would the stat 
> potential still hold if i assume membrane proteins are just soluble proteins 
> in side out ? dunno?

You can certainly try it, but to the best of my knowledge only 
single-chain globular proteins were used to derive DOPE, so the 
statistics may not hold in your case.

	Ben Webb, Modeller Caretaker
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