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[modeller_usage] protein-dna complex modeling
- To: modeller_usage@listsrv.ucsf.edu
- Subject: [modeller_usage] protein-dna complex modeling
- From: "prasun kumar" <prasun30 AT gmail.com>
- Date: Fri, 22 Aug 2008 01:40:31 +0100
Dear users,
I am trying to model a protein DNA complex.but nucleotides are not defined in the rtp file of modeller.
I went through the FAQs of modeller,there I got some clue to make a top file for nucleotides.But I am unable to make charmm top file because I dont have charmm.
so can you suggest any other method to make topology file.
waiting for your suggestions.
prasun kumar
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PRASUN (ASHOKA)