Re: [modeller_usage] modeling a fragment of the target and template sequences

[Modeller Caretaker <modeller-care@ucsf.edu>]

On 07/21/2009 12:45 AM, bharat lal wrote:
> I was jus modeling the structure of 1fdx protein , taking the target
> 5fd1 (all these files are already there) but after running the script it
> closes all of a sudden in between and when modeling for the whole of the
> template and target sequence .. its giving structure .. So can u tell me
> where am i going wrong ??

Sorry, but that's not really enough information to answer your question. 
What do you mean by "closes all of a sudden in between"? Most likely you 
have an error in your script, which Python will report on the command 
line as an exception. But it sounds like you are double-clicking on the 
Python script (perhaps on a Windows machine?). You won't see any of the 
script's output that way - you should run it from the command line, or 
from a Python development environment such as IDLE.

> If i am executing the script from the command line .. its not getting
> executed ..

What is the error message?

	Ben Webb, Modeller Caretaker
--
modeller-care@ucsf.edu             http://www.salilab.org/modeller/
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage