Re: [modeller_usage] using the parallel job support

[Modeller Caretaker <modeller-care@ucsf.edu>]

On 3/11/10 10:18 AM, Will Dampier wrote:
> I'm trying to use the parallel job support built into modeller.  I've
> gotten the jobs to work with "local_slave" workers but when I try to use
> ssh_slave workers I get an OSError
>
> "OSError [Errno 2] No such file or directory:
> '/opt/apps/Protein-Threading' from <ssh_clave on iblade003".
>
> I know that ssh_slaves require a shared memory space and I know that
> everything in properly mounted ... running: ssh iblade003 'ls
> /opt/apps/Protein-Threading' return the proper results.

Hmm, that is odd, because the ssh_slave class doesn't do anything 
unusual - it just runs "ssh iblade003" and fires up a copy of Python at 
the other end. Usually I would be tempted to suspect autofs (if you 
auto-mount those partitions; sometimes autofs can be a little slow and 
not mount them in time) or a permissions/environment issue.

	Ben Webb, Modeller Caretaker
--
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