Re: [modeller_usage] automodel/Mymodel

[Modeller Caretaker <modeller-care@ucsf.edu>]

On 7/1/13 5:00 AM, Ramin Ekhteiari wrote:
> please let me know the main deference between these two python scripts.
> I suppose the deference is *this*:
> the first one do the comparative modeling with the base of template for
> all residues,
> but the second one, do the same except for residues 197 - 198.

Yes, that's right.

> But I see a main deference between the results (output structures)
> are the applied methods of these two script are the same or not?

Of course the output structures will be different, because you're 
optimizing a different set of residues. But the method used is the same 
in both cases.

	Ben Webb, Modeller Caretaker
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