Re: [modeller_usage] Modeller API

[Modeller Caretaker <modeller-care@ucsf.edu>]

On 2/4/15 12:14 AM, Mouses Stamboulian wrote:
> ​Hi, I'm a student at the Lebanese American University and I was
> wondering if there is an API for Modeller.

http://salilab.org/modeller/9.14/manual/node477.html

> I want to use modeller in my
> java code. am I able to call modeller methods through Java? for instance
> feed the program with two alignments and give a command in my java code
> to model the 3D strcutre.

For this sort of high-level usage, you might find it easier to use the 
Python interface (either by generating a little Python script or by 
using some sort of direct Java to Python interface like Jython).

	Ben Webb, Modeller Caretaker
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