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Re: [modeller_usage] Fixed amino acids?

On 11/16/15 6:40 AM, Kalantzi Alexandra Styliani wrote:

I would like to build a protein structure based on multiple
homologous proteins. But is it possible to keep few amino acids (main
and side chain) of a homologous structure fixed and build the rest of
the structure around these?
Sure, you can ask Modeller to only refine part of the model; see http://salilab.org/modeller/9.15/manual/node23.html 

	Ben Webb, Modeller Caretaker
--
             https://salilab.org/modeller/
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