Re: [modeller_usage] fwd:problem with GluP ACe CT3 patch

[Modeller Caretaker <>]

On 4/21/16 2:42 AM, Prevost Martine wrote:
> Below is the full input:

The full input would also include any alignment or PDB files; see
https://salilab.org/modeller/9.16/manual/node10.html

> I don't understand the argument for GLUP in noH models. If the total
> charge of GLUP is zero it should influence differently (compared to
> Glu -1) the interaction of it with surrounding residues in the
> construction of the model via the classical part of the force field
> (Coulomb term)?

The Modeller forcefield doesn't contain a Coulomb term.

	Ben Webb, Modeller Caretaker
--
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