Re: [modeller_usage] ModellerError: read_te_290E> Number of residues in the alignment and pdb files are different

[Modeller Caretaker <modeller-care@ucsf.edu>]

On 8/7/18 12:29 PM, Ahmad Khalifa wrote:
> I'm getting this error "ModellerError: read_te_290E> Number of residues 
> in the alignment and  pdb files are different:      864      861 For 
> alignment entry:        1  3jar_template".

Your alignment file tells Modeller to read 861 residues from the PDB 
file, so that's what it did:

>  >P1;3jar_template
> structureX:3jar_template.pdb:   1 :B:+861 :K:::-1.00:-1.00

First thing I would try is to change that +861 to +864.

	Ben Webb, Modeller Caretaker
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