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[modeller_usage] External Source Sequence Alignment
To : "modeller_usageATsalilab.org " <modeller_usageATsalilab.org >Subject : [modeller_usage] External Source Sequence AlignmentFrom : "Li,Haoxi" <hl2500ATchem.ufl.edu >Date : Fri, 25 Sep 2020 19:22:31 +0000Accept-language : en-USArc-authentication-results : i=1; mx.microsoft.com 1; spf=pass smtp.mailfrom=chem.ufl.edu; dmarc=pass action=none header.from=chem.ufl.edu; dkim=pass header.d=chem.ufl.edu; arc=noneArc-message-signature : i=1; a=rsa-sha256; c=relaxed/relaxed; d=microsoft.com; s=arcselector9901; h=From:Date:Subject:Message-ID:Content-Type:MIME-Version:X-MS-Exchange-SenderADCheck; bh=DV7HPIorp6eo4mq7vnItKiGuJixszeBdyq9T2vNyzKA=; b=Jm6gvCU/fgt7fkfl2WMRUfiuiPCVmGk7Zj/3fhEYiWYfYSedMKRe5cukYyOigNtuG8jXRhcfE+9c1vbf7Pg2zIGgKJALzvbl4fcSAdwTn5ufGYDSO2+oPdmZDmxF4QsIS1WZgeE3WNS8qZBKkW+6CuIZWYRlgAAWIAG23+idB/mD0TmwrItbH3OXR0t4D+SctzGSADL3R2Zj12TfIZiNH4NkSIDA2XEKDGL1YqX3x2h+Cyv4N4M0ggnQWFCOm6yX95XYcJvHtFdizQ0sDI3vpwcOWPMxErcnJhUt/eNdn/XNRKIxwfJkFVronT6sytWbGRzpiEMU1tndyUB+SY5b7A==Arc-seal : i=1; a=rsa-sha256; s=arcselector9901; d=microsoft.com; cv=none; b=bnbo/0/dyivwlx+6vPuVEwXwfWkDga1YuD3XFL3ajgRfm4JuFv5ClwFUbx2i5sLjR5Y4ewDeS1OHeUh3jvG4HJ4GABQ/3LVP0/Ut9NZz/bH/06E6Cfup06thzAzHFfcXfu5bLxW1rYuJbbwj6swwO4yRipKZ551va9b1AKKb4KzE46Lh3h3arZptqf2AKvzi4FQYdPGKMxHsSXFy2mXMuU/KDRzhA81mo/EbHNgSs0VoWV5WqHbWkjewypE7bdOAZgstnT8Jsly+UWQDbbDHiNe/1yzPNXOdTZYAixHGSVTmDgDjU+iBarcugKIr4GrvoZSNQi+ngqyBz0BrTRWmFA==
Dear Modeller Users,
Hope this email finds you well! I have a question about building homology models with sequence alignments coming from external sources (BLAST, PROMALS3D, etc). Since PIR format alignment files are usually not provided by these sources, do I need to manually construct the file based on the alignment I have? Are there any other ways? Thank you so much!
Best wishes,
Haoxi