Re: [modeller_usage] remodelling a fragment of protein using different template.

[Modeller Caretaker <>]

On 2/15/21 9:11 AM, Yogesh Sharma wrote:
>   I am trying to model a protein with low homology. I have used ab 
> initio methods to get a starting structure. but i want to remodel first 
> 50-100 residues according to a different PDB template. is it possible to 
> do so using modeller?

Sure, just model using two templates, one for the first 50-100 residues 
and your ab initio model for the rest. See
https://salilab.org/modeller/FAQ.html#1

	Ben Webb, Modeller Caretaker
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