[modeller_usage] Re: Modelling based on two templates - one oligomer and one monomer

[hmad3 AT cam.ac.uk]

Dear Ben,
Thank you very much. One last question (I'm pretty new to Modeller) about the .ali file and Python code:

* I presume that for the .ali file, the header for the AF sequences would be
>P1;temp2
structureX:temp2::A::A::::

and what would the part of the Python code that looks like:
a = automodel(env,
            alnfile  = 'alignment.ali' ,     # alignment filename
            knowns   = 'temp1',              # codes of the templates
            sequence = 'target')              # code of the target
need to look like? Would there need to be a list/array for "knowns"?

With kind regards,
Amanda