Re: [modeller_usage] Tweaking around with the same alignment
To: Eugene Radchenko <>,
Subject: Re: [modeller_usage] Tweaking around with the same alignment
From: Modeller Caretaker <>
Date: Thu, 19 Dec 2019 18:12:02 -0800
On 12/19/19 3:55 PM, Eugene Radchenko wrote:
Sometimes I want to play with different Modeller options and parameters
while working with the same alignment file.
However, to avoid overwriting the previous results, I actually have to
modify the alignment file and Modeller script anyway by changing the
target sequence name.
Am I doing something wrong and is there a better way?
Right, this is the normal way that automodel names its output files. But
you can change this by subclassing and overriding the
get_model_filename() method: