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Re: [modeller_usage] Modeller Outputs TER field wrong in PDB
- To: Pedro Guillem <pedro.guillem AT gmail.com>, modeller_usage@listsrv.ucsf.edu
- Subject: Re: [modeller_usage] Modeller Outputs TER field wrong in PDB
- From: Modeller Caretaker <modeller-care@ucsf.edu>
- Date: Wed, 17 Jun 2020 10:21:45 -0700
On 6/17/20 10:13 AM, Pedro Guillem wrote:
I had some issues today using some PDBs generated by Modeller, and I
tracked the error to the fact the TER fields inside the PDB have more
columns (which should not be there)
[...]
*TER 1396 DT D 35*
[...]
I understand that the TER separator is not supposed to have anything
afterwards. Is there a particular reason why Modeller is writing my TER
records like that? It should read only "TER"
You are incorrect - Modeller writes correct TER records; see
http://www.wwpdb.org/documentation/file-format-content/format33/sect9.html#TER
Ben Webb, Modeller Caretaker
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