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Documentation

The Modeller manual is available online. You can also download it, in HTML or PDF format.

For frequently asked questions about installation or usage, please check the FAQ. There are also other resources available contributed by the Modeller developers and other Modeller users.

For a step-by-step guide to building models with Modeller, with specific examples ranging from the basic to the difficult, try the Modeller tutorial.

Documentation is also available for older releases of Modeller.

Supplementary material is also available for several of our past workshops and publications, and is made available for completeness. However, much of it is out of date; many of the examples will not work with recent Modeller versions.

MODELLER (copyright © 1989-2026 Andrej Sali) is maintained by Ben Webb at the Departments of Biopharmaceutical Sciences and Pharmaceutical Chemistry, and California Institute for Quantitative Biomedical Research, Mission Bay Byers Hall, University of California San Francisco, San Francisco, CA 94143, USA. Any selling or distribution of the program or its parts, original or modified, is prohibited without a written permission from Andrej Sali. This file last modified: Thu Jan 29 16:59:57 PST 2026.