Modeller_Usage Mailing List (by thread)
- Re: [modeller_usage] Is it possible to change the output file directory?,
Modeller Caretaker
- Re: [modeller_usage] Error in opening log file.,
Modeller Caretaker
- [modeller_usage] CSA incorporation in salign,
Ashish Runthala
- [modeller_usage] Plot profile of All or selected assessment methods,
junior
- Re: [modeller_usage] What is Modeller v9.10 , can you explain to me?,
Modeller Caretaker
- [modeller_usage] Is there a way to it?,
Ashish Runthala
- [modeller_usage] Import Error: No module named _modeler,
Naresh
- [modeller_usage] modeller.ModellerError: read_al_373E> Protein specified in ALIGN_CODES(i) was not found in the alignment file; ALIGN_CODES( 1) = 3O96,
Naresh
- [modeller_usage] how to analyse the output file of align2d.py,
Naresh
- [modeller_usage] Need Help getting started,
Henry, Marcia B
- [modeller_usage] Phosphoserine residue,
Mike Bramson
- [modeller_usage] (no subject),
Francesco Pietra
- [modeller_usage] libraries issue,
Francesco Pietra
- [modeller_usage] generating homology models of reduced disulfide bonds,
Stephanie Schaefer
- [modeller_usage] problems with filling missing residue without moving exing ones,
Francesco Pietra
- [modeller_usage] Regarding Model Clustering,
Ashish Runthala
- [modeller_usage] Regarding Scoring Parameters,
Ashish Runthala
- [modeller_usage] modeling of movement of domain,
Ahmadreza Mehdipour
- [modeller_usage] run two file or two restrained together,
Pablo Fernandez Millan
- [modeller_usage] MAPRES limit,
Johs, Alexander
- [modeller_usage] error,
Rana Adnantahir
- [modeller_usage] to generate the DOPE plot,
Xiao-Ping Zhang
[modeller_usage] error in Virutualbox,
albert
[modeller_usage] loop error,
albert
[modeller_usage] Confusion between two models,
hari krishna
[modeller_usage] energy function scaling factors,
Armin Meier
[modeller_usage] How to use MODELLER as an ordinary Python module?,
Desmond Kho
[modeller_usage] Error: Ran out of slaves to run tasks,
Xiao-Ping Zhang
[modeller_usage] Special g,
zhoujinming
[modeller_usage] a question about loop refinement,
mircial
Re: [modeller_usage] Error running build_profile.py :Not enough bins in histogram,
Susana Tomasio
[modeller_usage] Template selection criteria.,
ARVIND PAL
[modeller_usage] a 20 aa loop,
albert
[modeller_usage] PDF score question,
albert
[modeller_usage] Regarding Usage of BLOSUM Matrix,
Ashish Runthala
Re: [modeller_usage] modeller_usage Digest, Vol 11, Issue 25,
Ashish Runthala
[modeller_usage] Regarding BLOSUM MATRICES & MODELLER ALIGNMENT,
Ashish Runthala
[modeller_usage] Modeller9.10 on Centos 6.2,
Irene Newhouse
[modeller_usage] Regarding .tree,
Ashish Runthala
[modeller_usage] Loop Modeling in a Protein-DNA Complex,
Alexander Predeus
[no subject],
Unknown
Re: [modeller_usage] modeller_usage Digest, Vol 11, Issue 30,
Alexander Predeus
[modeller_usage] ALIGN_CODES(i) error, Again,
Zumot, Elia Nabil
[modeller_usage] loop refinement,
rjayashree13-science
[modeller_usage] calculate energy for a given structure with MODELLER's C API and derivative with respect to all coordinates (x, y, z),
Valerio Lupperger
[modeller_usage] Is it possible to calculate energy for the given structure with MODELLER's C API and derivative with respect to all coordinates (x, y, z)?,
Valerio Lupperger
Re: [modeller_usage] 2. loop refinement () from modeller_usage Digest, Vol 11, Issue 32,
Jan H. Löhr
[modeller_usage] homology modelling with multiple subunits,
Zumot, Elia Nabil
[modeller_usage] Regarding protein 3D structure modeling,
vishal Nemaysh
[modeller_usage] mutate_selection.py,
ARVIND PAL
[modeller_usage] DNA-protein complex modelling discrepancy!!,
Sumedha Roy
[modeller_usage] Model Clustering,
Ashish Runthala
Re: [modeller_usage] modeller_usage Digest, Vol 11, Issue 35,
Ashish Runthala
[modeller_usage] model quality: GA341, DOPE and zDOPE,
richard k belew
[modeller_usage] rmsd from template,
Matthias Schmidt
[modeller_usage] problem in modeling protein with ligand,
NUTAN CHAUHAN
[modeller_usage] problem with Chain.join(),
Jan Kosinski
[modeller_usage] In what are the initial structures different?,
BIN ZHANG
Re: [modeller_usage] Error in ALIGN_CODES(i),
Modeller Caretaker
Re: [modeller_usage] modeller_usage Digest, Vol 11, Issue 42,
Ashish Runthala
[modeller_usage] calculating DOPE score,
NUTAN CHAUHAN
Re: [modeller_usage] modeller_usage Digest, Vol 11, Issue 44,
Ashish Runthala
[modeller_usage] Regarding Model Building,
Ashish Runthala
[modeller_usage] 2 BLK in one model,
Isaure Chauvot de Beauchêne
[modeller_usage] Loop refinement: setting the right anchors in multichain models,
Jérôme Hénin
[modeller_usage] modelling with hetatms,
Offord, Victoria
[modeller_usage] Invitation to connect on LinkedIn,
Uday Kumar
[modeller_usage] procheck problem.,
vishal Nemaysh
[modeller_usage] missing residues,
Mary Varughese
Re: [modeller_usage] modeller_usage Digest, Vol 11, Issue 54,
Ashish Runthala
[modeller_usage] Question about alignment.check(),
M
[modeller_usage] modeling different conformations of a protein from related structures,
EGY
[modeller_usage] Regarding Constraints covered in the Salign_Multiple_Struc.py,
Ashish Runthala
[modeller_usage] modeling homodimer with hetero atoms,
NUTAN CHAUHAN
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